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Exercise and the molecular clock: a new perspective
Structured exercise appears to slow molecular aging, with studies showing measurable reductions in biological age across multiple organs and systems. Credit: Shutterstock
A recent research perspective published in Aging, titled "Exercise as a geroprotector: focusing on epigenetic aging," synthesizes mounting evidence that regular, planned exercise can slow — and in some cases partially reverse — biological aging measured at the DNA level. Led by Takuji Kawamura of Tohoku University, the review consolidates human and animal studies using epigenetic clocks, DNA methylation signatures and other molecular markers to map how physical activity shapes cellular aging.
Epigenetic aging differs from chronological age by estimating how “old” tissues appear at the molecular level. Epigenetic clocks use patterns of DNA methylation — chemical tags that can switch genes on or off — to calculate a biological age that often predicts disease risk and functional decline more accurately than years lived. Lifestyle factors such as diet, smoking and, importantly, physical activity influence these epigenetic signatures. The review argues that structured exercise and maintained cardiorespiratory fitness are among the most effective behavioral interventions shown to modify epigenetic aging trajectories.
Scientific background and key evidence
What epigenetic clocks measure
Epigenetic clocks quantify methylation at sets of cytosine–phosphate–guanine (CpG) sites across the genome to produce an estimated biological age. Accelerated epigenetic age (biological age higher than chronological age) associates with higher morbidity and mortality; decelerated epigenetic age suggests preserved cellular function.
Types of exercise and comparative effects
The review distinguishes casual physical activity (walking, chores) from structured exercise: planned, repetitive, goal-directed programs such as aerobic training, interval work and resistance (strength) training. Across multiple studies, structured regimens produce larger shifts in epigenetic-age markers than unstructured activity. Cardiorespiratory fitness—often measured as maximal oxygen uptake (VO2max)—shows one of the strongest associations with slower epigenetic aging.

Animal and human trial data
Controlled studies in mice demonstrate that endurance and resistance protocols reduce age-related molecular changes in skeletal muscle. In humans, several multi-week intervention trials report measurable reductions in epigenetic age in blood and muscle following combined aerobic and strength training. For example, a trial of previously sedentary middle-aged women showed an average decline in epigenetic age on the order of ≈2 years after an eight-week combined program. Observational data reinforce these results: highly trained athletes, including some Olympic competitors, often exhibit slower epigenetic aging than less active peers, suggesting long-term intensive training may yield durable molecular benefits.
The review also highlights that exercise effects reach beyond skeletal muscle to cardiac tissue, liver, adipose (fat) tissue and the gut microbiome—systems implicated in metabolic disease and frailty.
Mechanisms, implications and research gaps
Researchers propose several biological mechanisms linking exercise to slower epigenetic aging: reductions in systemic inflammation, improved mitochondrial function, enhanced DNA repair and altered cell-signaling networks that together affect methylation patterns. Exercise-induced changes in circulating metabolites and immune cell composition may also contribute to the observed shifts in epigenetic clocks.
Despite promising results, key questions remain. Why do some individuals show larger epigenetic-age responses than others? How do exercise intensity, duration and mode (endurance vs. resistance vs. high-intensity interval training) differentially affect specific organs? Can long-term training produce permanent reversal of biological age or only transient improvements? The authors call for larger randomized trials with tissue-specific sampling and standardized epigenetic measures to resolve these issues and guide personalized prescriptions.
Practical takeaway
For clinicians and the public, the emerging consensus is actionable: regular structured exercise and maintaining or improving cardiorespiratory fitness are likely to slow molecular aging across multiple organ systems. While precise “doses” remain under study, combining aerobic work with resistance training and progressively improving VO2max appears to maximize benefits for epigenetic age.
Expert Insight
Dr. Maria López, Professor of Geroscience (fictional), University of Lisbon: "The convergence of animal experiments and human trials is compelling. We are no longer looking at fitness merely as a way to preserve muscle or cardiovascular function — physical activity is a systemic intervention that reshapes the molecular landscape tied to aging. The next step is tailoring exercise programs to an individual’s biology so we can reliably translate these epigenetic changes into longer healthspan."
This expert perspective underscores both optimism and a need for precision. Translational research should pair exercise interventions with genomic, metabolomic and microbiome profiling to identify responders and to refine recommendations for diverse populations.
Future directions and technologies
Emerging tools—wearable sensors that track intensity and recovery, home-based cardiopulmonary testing for VO2 estimation, and lower-cost epigenetic assays—will accelerate studies linking real-world training to molecular outcomes. Integrating these technologies with machine learning models could enable personalized, adaptive exercise prescriptions targeted at slowing biological aging. Clinical trials that combine exercise with dietary, pharmacological or microbiome-targeted interventions may further amplify anti-aging effects.
Conclusion
A growing body of evidence indicates that structured exercise and high cardiorespiratory fitness are associated with slower epigenetic aging across multiple organs. While more work is needed to define optimal programs and individual responsiveness, current data support exercise as a powerful, accessible geroprotective strategy to extend healthspan. Prioritizing regular aerobic and resistance training—not just general activity—may shift the body’s molecular clock toward a younger biological profile and reduce the burden of age-related disease.

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